For guest users
Feel free to submit any kind of job on "Run TaxOnTree" box.
Job results can be retrieved on "Get your result" box (just save your jobID).
You can Sign up and/or Login to store your jobs and quickly access there status and results on "Job table" box.
Run TaxOnTree
query identifier ok Examples: #1 #2
Amino acid sequence ok Examples: #1 #2
List of identifiers ok Examples: #1 #2
Tree in Newick ok Examples: #1 #2


Your job will be saved in a guest account.

BLAST options
Sequence Database:
Threshold (%): ok
Evalue: ok
Maximum targets number: ok
Alignment options
Analyze alignment with TrimAl.ok

Alignment software
Filter options
Exclude protein isoforms.ok

Limit the number of taxa in clades of a taxonomic category: Show taxa per ok

Show only samples from organisms in which the LCA level is equal or higher than . ok
Tree options
Tree rooting method: More
Leaf name format:
Get your result

TaxOnTree generates a phylogenetic tree in NEXUS format designed to be openned in FigTree. Blast result and sequence alignment are also available for download.

FigTree is available for download here or at FigTree's website.

Here are some NEXUS file generated by TaxOnTree: Sample #1 #2 #3

Instructions for visualizing your tree on FigTree can be found here

Getting error?

Check out the log file to have some clues on what is causing the error.

Job table
History of your jobs is displayed here. Login to enable your job table.

Biological data are retrieved from NCBI (Copyright and Disclaimers) and Uniprot